daTALbase - Database for TAL Effectors analysis


daTALbase is a curated relational database that integrates TALE-related data including:
  • bacterial TALE sequences
  • plant promoter sequences
  • predicted TALE binding sites
  • transcriptomic data of host plants in response to TALE-harboring bacteria
  • and other associated data: SNPs, orthologs...
The database can be explored to uncover candidate new susceptibility genes, as well as to study variation in TALE repertories and their corresponding targets.

Species:
Rice Cassava Citrus
Citrus (coming soon)

Cabbage Beans
Beans (coming soon)
Barley
Barley (coming soon)

Please cite:
"Perez-Quintero Alvaro L, Lamy Leo, Doyle Erin, Bogdanove Adam, Cunnac Sebastien, Szurek Boris and Dereeper Alexis. daTALbase: a database for genomic and transcriptomic data related to TAL effectors. Molecular Plant-Microbe Interactions Journal, 2017"

Contacts: Alvaro Perez, Alexis Dereeper (IRD), Boris Szurek (IRD)



IRD logo       IPME logo       Southgreen logo