NanoPlot report
Summary statistics
|
| General summary: |
| Mean read quality: | 9.8 |
| Total bases: | 50311337 |
| Read length N50: | 1580 |
| Median read length: | 938.0 |
| Median read quality: | 9.4 |
| Number of reads: | 44056 |
| Mean read length: | 1142.0 |
| Active channels: | 438 |
|
| Number and percentage of reads above quality cutoffs |
| >Q5: | 44055 (100.0%) |
| >Q10: | 16023 (36.4%) |
| >Q15: | 8 (0.0%) |
| >Q20: | 0 (0.0%) |
| >Q25: | 0 (0.0%) |
|
| Top 5 longest reads and their mean basecall quality score |
| 1: | 8423 (9.3) |
| 2: | 5325 (9.9) |
| 3: | 5087 (11.2) |
| 4: | 5052 (10.3) |
| 5: | 4852 (10.5) |
|
| Top 5 highest mean basecall quality scores and their read lengths |
| 1: | 15.9 (159) |
| 2: | 15.9 (8) |
| 3: | 15.8 (122) |
| 4: | 15.7 (153) |
| 5: | 15.1 (135) |
Plots
Histogram of read lengths
Weighted Histogram of read lengths
Yield by length
Read lengths vs Average read quality plot using dots
Read lengths vs Average read quality plot using a kernel density estimation
Number of reads generated per channel
Cumulative yield
Cumulative yield
Number of reads over time
Violin plot of read lengths over time
Violin plot of quality over time
