Summary Statistics

Plots

Histogram of read lengths

Histogram of read lengths after log transformation

Weighted Histogram of read lengths

Weighted Histogram of read lengths after log transformation

Yield by length

Read lengths vs Average read quality plot using dots

Read lengths vs Average read quality plot using a kernel density estimation

Number of reads generated per channel

Cumulative yield

Cumulative yield

Number of reads over time

Violin plot of read lengths over time

Violin plot of quality over time

NanoPlot report

Summary statistics

General summary:
Active channels:438
Median read length:1054.0
Number of reads:44611
Mean read quality:9.7
Median read quality:9.4
Mean read length:1235.1
Total bases:55101113
Read length N50:1646
Top 5 longest reads and their mean basecall quality score
1:8468 (9.3)
2:6969 (9.2)
3:5956 (8.0)
4:5472 (9.9)
5:5192 (11.1)
Top 5 highest mean basecall quality scores and their read lengths
1:14.1 (303)
2:14.0 (674)
3:13.9 (686)
4:13.8 (298)
5:13.7 (1064)
Number and percentage of reads above quality cutoffs
>Q5:44611 (100.0%)
>Q10:15467 (34.7%)
>Q15:0 (0.0%)
>Q20:0 (0.0%)
>Q25:0 (0.0%)




Plots

Histogram of read lengths





Histogram of read lengths after log transformation





Weighted Histogram of read lengths





Weighted Histogram of read lengths after log transformation





Yield by length





Read lengths vs Average read quality plot using dots





Read lengths vs Average read quality plot using a kernel density estimation





Number of reads generated per channel





Cumulative yield





Cumulative yield





Number of reads over time





Violin plot of read lengths over time





Violin plot of quality over time